HCSGD entry for PTMS
1. General information
| Official gene symbol | PTMS |
|---|---|
| Entrez ID | 5763 |
| Gene full name | parathymosin |
| Other gene symbols | ParaT |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0002376 | Immune system process | IEA | biological_process |
| GO:0005634 | Nucleus | TAS | cellular_component |
| GO:0006260 | DNA replication | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9655191862 | 0.0252517154 | 0.9999902473 | 0.3055863908 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0982096324 |
| GSE13712_SHEAR | Down | -0.2191154924 |
| GSE13712_STATIC | Down | -0.4028814751 |
| GSE19018 | Up | 0.0443179133 |
| GSE19899_A1 | Down | -0.2413347724 |
| GSE19899_A2 | Down | -0.0451879319 |
| PubMed_21979375_A1 | Down | -0.5246378265 |
| PubMed_21979375_A2 | Down | -0.3153339109 |
| GSE35957 | Down | -0.0750180479 |
| GSE36640 | Down | -0.2033185253 |
| GSE54402 | Down | -0.0789087811 |
| GSE9593 | Down | -0.0539218891 |
| GSE43922 | Down | -0.2782125503 |
| GSE24585 | Down | -0.2878122841 |
| GSE37065 | Down | -0.2450100299 |
| GSE28863_A1 | Down | -0.6287653554 |
| GSE28863_A2 | Down | -0.7634480630 |
| GSE28863_A3 | Up | 0.1400802082 |
| GSE28863_A4 | Up | 0.2704369162 |
| GSE48662 | Up | 0.4830531475 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-22-3p | MIMAT0000077 | MIRT006467 | Luciferase reporter assay//Microarray//Northern blot//qRT-PCR//Western blot | Functional MTI | 22493679 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016446 | Proteomics | Functional MTI (Weak) | 21512034 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020881 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025517 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028559 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038470 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-423-3p | MIMAT0001340 | MIRT042551 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
