HCSGD entry for CADM3
1. General information
| Official gene symbol | CADM3 |
|---|---|
| Entrez ID | 57863 |
| Gene full name | cell adhesion molecule 3 |
| Other gene symbols | BIgR IGSF4B NECL1 Necl-1 TSLL1 synCAM3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0005911 | Cell-cell junction | ISS | cellular_component |
| GO:0007156 | Homophilic cell adhesion | ISS | biological_process |
| GO:0007157 | Heterophilic cell-cell adhesion | ISS | biological_process |
| GO:0008104 | Protein localization | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0034329 | Cell junction assembly | TAS | biological_process |
| GO:0034332 | Adherens junction organization | TAS | biological_process |
| GO:0042803 | Protein homodimerization activity | ISS | molecular_function |
| GO:0045216 | Cell-cell junction organization | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3368714107 | 0.2686832073 | 0.9999902473 | 0.9921451599 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1353904885 |
| GSE13712_SHEAR | Down | -1.2628057208 |
| GSE13712_STATIC | Down | -1.1394034545 |
| GSE19018 | Up | 0.1276537695 |
| GSE19899_A1 | Up | 0.0584824945 |
| GSE19899_A2 | Up | 0.0122611257 |
| PubMed_21979375_A1 | Down | -0.0450279857 |
| PubMed_21979375_A2 | Down | -0.1397164233 |
| GSE35957 | Up | 0.0366034290 |
| GSE36640 | Up | 0.0458577679 |
| GSE54402 | Up | 0.0543895627 |
| GSE9593 | Down | -0.0512500561 |
| GSE43922 | Up | 0.0314988587 |
| GSE24585 | Up | 0.0880945088 |
| GSE37065 | Down | -0.3203778902 |
| GSE28863_A1 | Up | 0.3969715000 |
| GSE28863_A2 | Up | 1.9346593409 |
| GSE28863_A3 | Up | 0.0383378614 |
| GSE28863_A4 | Up | 0.0603084383 |
| GSE48662 | Down | -0.0104887231 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
