HCSGD entry for RAB13

1. General information

Official gene symbolRAB13
Entrez ID5872
Gene full nameRAB13, member RAS oncogene family
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003924GTPase activityEXPmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005525GTP bindingIDAmolecular_function
GO:0005737CytoplasmIDAcellular_component
GO:0005794Golgi apparatusIDAcellular_component
GO:0005802Trans-Golgi networkIDAcellular_component
GO:0005886Plasma membraneIDAcellular_component
GO:0005923Tight junctionIDAcellular_component
GO:0006184GTP catabolic processEXPbiological_process
GO:0007264Small GTPase mediated signal transductionIEAbiological_process
GO:0008152Metabolic processEXPbiological_process
GO:0010737Protein kinase A signalingIMPbiological_process
GO:0015031Protein transportIEAbiological_process
GO:0016197Endosomal transportIMPbiological_process
GO:0016328Lateral plasma membraneIDAcellular_component
GO:0030027LamellipodiumISScellular_component
GO:0030139Endocytic vesicleIDAcellular_component
GO:0030658Transport vesicle membraneIEAcellular_component
GO:0030659Cytoplasmic vesicle membraneTAScellular_component
GO:0030866Cortical actin cytoskeleton organizationISSbiological_process
GO:0031175Neuron projection developmentIMPbiological_process
GO:0031410Cytoplasmic vesicleIDAcellular_component
GO:0032456Endocytic recyclingIMPbiological_process
GO:0032593Insulin-responsive compartmentISScellular_component
GO:0032869Cellular response to insulin stimulusISSbiological_process
GO:0034236Protein kinase A catalytic subunit bindingIEAmolecular_function
GO:0035767Endothelial cell chemotaxisISSbiological_process
GO:0043005Neuron projectionIDAcellular_component
GO:0044795Trans-Golgi network to recycling endosome transportISSbiological_process
GO:0055037Recycling endosomeIDAcellular_component
GO:0055038Recycling endosome membraneIEAcellular_component
GO:0070830Tight junction assemblyIMPbiological_process
GO:0090002Establishment of protein localization to plasma membraneIMPbiological_process
GO:0097368Establishment of Sertoli cell barrierISSbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.67566001290.11482227880.99999024730.6492405539

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.2946767167
GSE13712_SHEARDown-0.6087892968
GSE13712_STATICDown-0.5849904625
GSE19018Down-0.6528983791
GSE19899_A1Up0.0809393117
GSE19899_A2Down-0.4501706348
PubMed_21979375_A1Down-0.6968340861
PubMed_21979375_A2Down-0.1473980439
GSE35957Up0.1486172550
GSE36640Up0.0315739012
GSE54402Up0.2155227313
GSE9593Up0.0927230219
GSE43922Down-0.3427371840
GSE24585Up0.4376416252
GSE37065Up0.0575042088
GSE28863_A1Up0.2622586663
GSE28863_A2Up0.1043824946
GSE28863_A3Down-0.3228551860
GSE28863_A4Down-0.1130763925
GSE48662Up0.1641718626

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-19a-3pMIMAT0000073MIRT007119Luciferase reporter assayFunctional MTI23451058
hsa-miR-93-3pMIMAT0004509MIRT038865CLASHFunctional MTI (Weak)23622248
hsa-miR-18a-3pMIMAT0002891MIRT040836CLASHFunctional MTI (Weak)23622248
hsa-let-7a-5pMIMAT0000062MIRT052605CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.