HCSGD entry for RAD51B
1. General information
| Official gene symbol | RAD51B |
|---|---|
| Entrez ID | 5890 |
| Gene full name | RAD51 homolog B (S. cerevisiae) |
| Other gene symbols | R51H2 RAD51L1 REC2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005634 | Nucleus | TAS | cellular_component |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0006259 | DNA metabolic process | IEA | biological_process |
| GO:0006281 | DNA repair | IEA | biological_process |
| GO:0006310 | DNA recombination | TAS | biological_process |
| GO:0007131 | Reciprocal meiotic recombination | TAS | biological_process |
| GO:0007596 | Blood coagulation | TAS | biological_process |
| GO:0008094 | DNA-dependent ATPase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6690074427 | 0.7742319403 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0622891678 |
| GSE13712_SHEAR | Up | 0.1442008702 |
| GSE13712_STATIC | Down | -0.0583355157 |
| GSE19018 | Up | 0.2226553485 |
| GSE19899_A1 | Up | 0.1090762608 |
| GSE19899_A2 | Down | -0.1556535457 |
| PubMed_21979375_A1 | Down | -0.0254209002 |
| PubMed_21979375_A2 | Down | -0.0357241380 |
| GSE35957 | Down | -0.1330893670 |
| GSE36640 | Down | -0.6471990778 |
| GSE54402 | Up | 0.0994197503 |
| GSE9593 | Up | 0.0244106844 |
| GSE43922 | Up | 0.0077030711 |
| GSE24585 | Up | 0.0005212528 |
| GSE37065 | Up | 0.2772495604 |
| GSE28863_A1 | Up | 0.0947166173 |
| GSE28863_A2 | Up | 0.0395753191 |
| GSE28863_A3 | Down | -0.0046228436 |
| GSE28863_A4 | Up | 0.0476688595 |
| GSE48662 | Down | -0.0581625447 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-484 | MIMAT0002174 | MIRT041780 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
