HCSGD entry for SCOC
1. General information
| Official gene symbol | SCOC |
|---|---|
| Entrez ID | 60592 |
| Gene full name | short coiled-coil protein |
| Other gene symbols | SCOCO |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005768 | Endosome | IDA | cellular_component |
| GO:0005802 | Trans-Golgi network | IDA | cellular_component |
| GO:0005829 | Cytosol | IEA | cellular_component |
| GO:0016239 | Positive regulation of macroautophagy | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1905122640 | 0.7626853919 | 0.8480330347 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1325203171 |
| GSE13712_SHEAR | Down | -0.0673440930 |
| GSE13712_STATIC | Up | 0.1640679938 |
| GSE19018 | Up | 0.5139345954 |
| GSE19899_A1 | Up | 0.3047896292 |
| GSE19899_A2 | Down | -0.0828202829 |
| PubMed_21979375_A1 | Down | -0.0132437021 |
| PubMed_21979375_A2 | Down | -0.1591885326 |
| GSE35957 | Up | 0.5089018795 |
| GSE36640 | Up | 0.7480027393 |
| GSE54402 | Down | -0.0313435898 |
| GSE9593 | Up | 0.1972966782 |
| GSE43922 | Down | -0.0737866507 |
| GSE24585 | Up | 0.0767652177 |
| GSE37065 | Up | 0.1388374720 |
| GSE28863_A1 | Down | -0.2089510875 |
| GSE28863_A2 | Up | 0.0750610292 |
| GSE28863_A3 | Down | -0.0404423999 |
| GSE28863_A4 | Up | 0.0410643728 |
| GSE48662 | Down | -0.5986124867 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-424-5p | MIMAT0001341 | MIRT042453 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
