HCSGD entry for SPATA20
1. General information
| Official gene symbol | SPATA20 |
|---|---|
| Entrez ID | 64847 |
| Gene full name | spermatogenesis associated 20 |
| Other gene symbols | SSP411 Tisp78 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003824 | Catalytic activity | IEA | molecular_function |
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0007283 | Spermatogenesis | IEA | biological_process |
| GO:0030154 | Cell differentiation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2423711409 | 0.0257197713 | 0.9299010931 | 0.3081310282 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0311224249 |
| GSE13712_SHEAR | Up | 0.1584975445 |
| GSE13712_STATIC | Up | 0.0158808176 |
| GSE19018 | Up | 0.2076651990 |
| GSE19899_A1 | Down | -0.9312099182 |
| GSE19899_A2 | Down | -0.6650711224 |
| PubMed_21979375_A1 | Down | -1.1086774992 |
| PubMed_21979375_A2 | Up | 1.3803162127 |
| GSE35957 | Down | -0.5682468603 |
| GSE36640 | Up | 1.6073758888 |
| GSE54402 | Down | -0.6130953927 |
| GSE9593 | Up | 0.5751454442 |
| GSE43922 | Down | -1.1759907329 |
| GSE24585 | Up | 0.2246758543 |
| GSE37065 | Down | -0.3805299645 |
| GSE28863_A1 | Down | -0.2968407312 |
| GSE28863_A2 | Down | -0.0119232077 |
| GSE28863_A3 | Down | -0.2637813066 |
| GSE28863_A4 | Down | -0.0891137507 |
| GSE48662 | Up | 0.2917863453 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017283 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
