HCSGD entry for NOL6
1. General information
| Official gene symbol | NOL6 |
|---|---|
| Entrez ID | 65083 |
| Gene full name | nucleolar protein 6 (RNA-associated) |
| Other gene symbols | NRAP UTP22 bA311H10.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000794 | Condensed nuclear chromosome | ISS | cellular_component |
| GO:0003723 | RNA binding | ISS | molecular_function |
| GO:0005730 | Nucleolus | ISS | cellular_component |
| GO:0006364 | RRNA processing | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2608078416 | 0.5105204058 | 0.9540150639 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1581476277 |
| GSE13712_SHEAR | Up | 0.2799316726 |
| GSE13712_STATIC | Up | 0.5158622848 |
| GSE19018 | Down | -0.1560052812 |
| GSE19899_A1 | Down | -0.0030461186 |
| GSE19899_A2 | Up | 0.2133712135 |
| PubMed_21979375_A1 | Up | 0.0407182835 |
| PubMed_21979375_A2 | Up | 0.4593041475 |
| GSE35957 | Up | 0.1262694253 |
| GSE36640 | Up | 0.2398563709 |
| GSE54402 | Up | 0.0717267671 |
| GSE9593 | Down | -0.1064404204 |
| GSE43922 | Up | 0.0273470481 |
| GSE24585 | Down | -0.6999952442 |
| GSE37065 | Down | -0.2320622583 |
| GSE28863_A1 | Up | 0.2330797957 |
| GSE28863_A2 | Up | 0.1461563791 |
| GSE28863_A3 | Down | -0.2575270523 |
| GSE28863_A4 | Up | 0.0646625408 |
| GSE48662 | Down | -0.0432054438 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT032331 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040840 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041565 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
