HCSGD entry for CAPRIN2
1. General information
| Official gene symbol | CAPRIN2 |
|---|---|
| Entrez ID | 65981 |
| Gene full name | caprin family member 2 |
| Other gene symbols | C1QDC1 EEG-1 EEG1 RNG140 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005102 | Receptor binding | IPI | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005739 | Mitochondrion | IDA | cellular_component |
| GO:0017148 | Negative regulation of translation | IEA | biological_process |
| GO:0030308 | Negative regulation of cell growth | IDA | biological_process |
| GO:0032092 | Positive regulation of protein binding | IDA | biological_process |
| GO:0033138 | Positive regulation of peptidyl-serine phosphorylation | IDA | biological_process |
| GO:0043235 | Receptor complex | IDA | cellular_component |
| GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | IDA | biological_process |
| GO:0050775 | Positive regulation of dendrite morphogenesis | IEA ISS | biological_process |
| GO:0061003 | Positive regulation of dendritic spine morphogenesis | IEA ISS | biological_process |
| GO:0090263 | Positive regulation of canonical Wnt signaling pathway | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2667063371 | 0.2621568595 | 0.9624317933 | 0.9832189655 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1603976747 |
| GSE13712_SHEAR | Up | 0.3452851681 |
| GSE13712_STATIC | Up | 0.0398860283 |
| GSE19018 | Down | -0.5985501022 |
| GSE19899_A1 | Up | 0.0929011852 |
| GSE19899_A2 | Down | -0.1007225943 |
| PubMed_21979375_A1 | Up | 0.2671987107 |
| PubMed_21979375_A2 | Up | 0.1391434203 |
| GSE35957 | Down | -0.2073446388 |
| GSE36640 | Up | 0.0580367756 |
| GSE54402 | Up | 0.0803497703 |
| GSE9593 | Up | 0.0162206311 |
| GSE43922 | Up | 0.2424759752 |
| GSE24585 | Up | 0.0494055713 |
| GSE37065 | Up | 0.3679717749 |
| GSE28863_A1 | Down | -0.1328378350 |
| GSE28863_A2 | Down | -0.1594635228 |
| GSE28863_A3 | Down | -1.0050203608 |
| GSE28863_A4 | Up | 0.3640107730 |
| GSE48662 | Down | -0.3339091596 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT002910 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-340-5p | MIMAT0004692 | MIRT019554 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT027968 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-let-7f-5p | MIMAT0000067 | MIRT051382 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
