HCSGD entry for SSX1

1. General information

Official gene symbolSSX1
Entrez ID6756
Gene full namesynovial sarcoma, X breakpoint 1
Other gene symbolsCT5.1 SSRC
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003676Nucleic acid bindingIEAmolecular_function
GO:0003714Transcription corepressor activityTASmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0006355Regulation of transcription, DNA-templatedIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.54081007180.94062973290.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1478346712
GSE13712_SHEARDown-0.1425028421
GSE13712_STATICUp0.0829841255
GSE19018Up0.1384328537
GSE19899_A1Up0.0790249788
GSE19899_A2Up0.1404582723
PubMed_21979375_A1Up0.1046463931
PubMed_21979375_A2Up0.0774190804
GSE35957Up0.1337747299
GSE36640Up0.1257335096
GSE54402Down-0.0924224715
GSE9593Up0.0150375696
GSE43922Up0.0069805863
GSE24585Up0.1647856599
GSE37065Up0.0211607534
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Up0.0120655108

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-7-5pMIMAT0000252MIRT025895MicroarrayFunctional MTI (Weak)17612493
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.