HCSGD entry for TPM2
1. General information
| Official gene symbol | TPM2 |
|---|---|
| Entrez ID | 7169 |
| Gene full name | tropomyosin 2 (beta) |
| Other gene symbols | AMCD1 DA1 DA2B NEM4 TMSB |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003779 | Actin binding | IDA | molecular_function |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0005862 | Muscle thin filament tropomyosin | TAS | cellular_component |
| GO:0006936 | Muscle contraction | TAS | biological_process |
| GO:0008307 | Structural constituent of muscle | TAS | molecular_function |
| GO:0030049 | Muscle filament sliding | TAS | biological_process |
| GO:0043462 | Regulation of ATPase activity | IDA | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6666324038 | 0.0233053759 | 0.9999902473 | 0.2942066187 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2768804020 |
| GSE13712_SHEAR | Up | 0.0857688214 |
| GSE13712_STATIC | Down | -0.0626319523 |
| GSE19018 | Down | -0.4229531684 |
| GSE19899_A1 | Down | -0.2366705308 |
| GSE19899_A2 | Down | -0.0725434111 |
| PubMed_21979375_A1 | Down | -0.5814959782 |
| PubMed_21979375_A2 | Down | -0.1571076731 |
| GSE35957 | Up | 0.1534445279 |
| GSE36640 | Up | 0.5838360213 |
| GSE54402 | Down | -0.2666196808 |
| GSE9593 | Down | -0.2276924433 |
| GSE43922 | Down | -0.3062093555 |
| GSE24585 | Up | 0.3580924461 |
| GSE37065 | Down | -0.4618580710 |
| GSE28863_A1 | Down | -0.3755619773 |
| GSE28863_A2 | Down | -0.8995410079 |
| GSE28863_A3 | Up | 0.6158080953 |
| GSE28863_A4 | Up | 0.2675592258 |
| GSE48662 | Down | -0.4457247232 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT001326 | pSILAC//Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-1 | MIMAT0000416 | MIRT001326 | Proteomics;Microarray | Functional MTI (Weak) | 18668037 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
