HCSGD entry for UBA52
1. General information
Official gene symbol | UBA52 |
---|---|
Entrez ID | 7311 |
Gene full name | ubiquitin A-52 residue ribosomal protein fusion product 1 |
Other gene symbols | CEP52 HUBCEP52 L40 RPL40 |
Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network

This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
---|---|---|---|
GO:0000082 | G1/S transition of mitotic cell cycle | TAS | biological_process |
GO:0000122 | Negative regulation of transcription from RNA polymerase II promoter | TAS | biological_process |
GO:0000184 | Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | TAS | biological_process |
GO:0000187 | Activation of MAPK activity | TAS | biological_process |
GO:0000209 | Protein polyubiquitination | TAS | biological_process |
GO:0000278 | Mitotic cell cycle | TAS | biological_process |
GO:0002224 | Toll-like receptor signaling pathway | TAS | biological_process |
GO:0002474 | Antigen processing and presentation of peptide antigen via MHC class I | TAS | biological_process |
GO:0002479 | Antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent | TAS | biological_process |
GO:0002755 | MyD88-dependent toll-like receptor signaling pathway | TAS | biological_process |
GO:0002756 | MyD88-independent toll-like receptor signaling pathway | TAS | biological_process |
GO:0003735 | Structural constituent of ribosome | IEA NAS | molecular_function |
GO:0005515 | Protein binding | IPI | molecular_function |
GO:0005654 | Nucleoplasm | TAS | cellular_component |
GO:0005765 | Lysosomal membrane | IDA | cellular_component |
GO:0005829 | Cytosol | TAS | cellular_component |
GO:0005840 | Ribosome | IEA | cellular_component |
GO:0005886 | Plasma membrane | TAS | cellular_component |
GO:0006281 | DNA repair | TAS | biological_process |
GO:0006351 | Transcription, DNA-templated | TAS | biological_process |
GO:0006367 | Transcription initiation from RNA polymerase II promoter | TAS | biological_process |
GO:0006412 | Translation | IEA NAS TAS | biological_process |
GO:0006413 | Translational initiation | TAS | biological_process |
GO:0006414 | Translational elongation | TAS | biological_process |
GO:0006415 | Translational termination | TAS | biological_process |
GO:0006464 | Cellular protein modification process | TAS | biological_process |
GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | TAS | biological_process |
GO:0006915 | Apoptotic process | TAS | biological_process |
GO:0006977 | DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest | TAS | biological_process |
GO:0007141 | Male meiosis I | IEA | biological_process |
GO:0007144 | Female meiosis I | IEA | biological_process |
GO:0007173 | Epidermal growth factor receptor signaling pathway | TAS | biological_process |
GO:0007179 | Transforming growth factor beta receptor signaling pathway | TAS | biological_process |
GO:0007219 | Notch signaling pathway | TAS | biological_process |
GO:0007220 | Notch receptor processing | TAS | biological_process |
GO:0007249 | I-kappaB kinase/NF-kappaB signaling | TAS | biological_process |
GO:0007254 | JNK cascade | TAS | biological_process |
GO:0008543 | Fibroblast growth factor receptor signaling pathway | TAS | biological_process |
GO:0008585 | Female gonad development | IEA | biological_process |
GO:0010008 | Endosome membrane | TAS | cellular_component |
GO:0010467 | Gene expression | TAS | biological_process |
GO:0010992 | Ubiquitin homeostasis | IEA | biological_process |
GO:0016032 | Viral process | TAS | biological_process |
GO:0016070 | RNA metabolic process | TAS | biological_process |
GO:0016071 | MRNA metabolic process | TAS | biological_process |
GO:0016197 | Endosomal transport | TAS | biological_process |
GO:0019058 | Viral life cycle | TAS | biological_process |
GO:0019068 | Virion assembly | TAS | biological_process |
GO:0019082 | Viral protein processing | TAS | biological_process |
GO:0019083 | Viral transcription | TAS | biological_process |
GO:0019221 | Cytokine-mediated signaling pathway | TAS | biological_process |
GO:0021888 | Hypothalamus gonadotrophin-releasing hormone neuron development | IEA | biological_process |
GO:0022625 | Cytosolic large ribosomal subunit | IDA | cellular_component |
GO:0030512 | Negative regulation of transforming growth factor beta receptor signaling pathway | TAS | biological_process |
GO:0030666 | Endocytic vesicle membrane | TAS | cellular_component |
GO:0031145 | Anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | TAS | biological_process |
GO:0032479 | Regulation of type I interferon production | TAS | biological_process |
GO:0032480 | Negative regulation of type I interferon production | TAS | biological_process |
GO:0032481 | Positive regulation of type I interferon production | TAS | biological_process |
GO:0034134 | Toll-like receptor 2 signaling pathway | TAS | biological_process |
GO:0034138 | Toll-like receptor 3 signaling pathway | TAS | biological_process |
GO:0034142 | Toll-like receptor 4 signaling pathway | TAS | biological_process |
GO:0034146 | Toll-like receptor 5 signaling pathway | TAS | biological_process |
GO:0034162 | Toll-like receptor 9 signaling pathway | TAS | biological_process |
GO:0034166 | Toll-like receptor 10 signaling pathway | TAS | biological_process |
GO:0034220 | Ion transmembrane transport | TAS | biological_process |
GO:0035666 | TRIF-dependent toll-like receptor signaling pathway | TAS | biological_process |
GO:0035872 | Nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway | TAS | biological_process |
GO:0038095 | Fc-epsilon receptor signaling pathway | TAS | biological_process |
GO:0038123 | Toll-like receptor TLR1:TLR2 signaling pathway | TAS | biological_process |
GO:0038124 | Toll-like receptor TLR6:TLR2 signaling pathway | TAS | biological_process |
GO:0042059 | Negative regulation of epidermal growth factor receptor signaling pathway | TAS | biological_process |
GO:0042590 | Antigen processing and presentation of exogenous peptide antigen via MHC class I | TAS | biological_process |
GO:0042981 | Regulation of apoptotic process | TAS | biological_process |
GO:0043065 | Positive regulation of apoptotic process | TAS | biological_process |
GO:0043066 | Negative regulation of apoptotic process | TAS | biological_process |
GO:0043123 | Positive regulation of I-kappaB kinase/NF-kappaB signaling | TAS | biological_process |
GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
GO:0045087 | Innate immune response | TAS | biological_process |
GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | TAS | biological_process |
GO:0048011 | Neurotrophin TRK receptor signaling pathway | TAS | biological_process |
GO:0050852 | T cell receptor signaling pathway | TAS | biological_process |
GO:0051092 | Positive regulation of NF-kappaB transcription factor activity | TAS | biological_process |
GO:0051403 | Stress-activated MAPK cascade | TAS | biological_process |
GO:0051436 | Negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle | TAS | biological_process |
GO:0051437 | Positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle | TAS | biological_process |
GO:0051439 | Regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle | TAS | biological_process |
GO:0055085 | Transmembrane transport | TAS | biological_process |
GO:0060613 | Fat pad development | IEA | biological_process |
GO:0061418 | Regulation of transcription from RNA polymerase II promoter in response to hypoxia | TAS | biological_process |
GO:0070423 | Nucleotide-binding oligomerization domain containing signaling pathway | TAS | biological_process |
GO:0071456 | Cellular response to hypoxia | TAS | biological_process |
GO:0072520 | Seminiferous tubule development | IEA | biological_process |
GO:0097009 | Energy homeostasis | IEA | biological_process |
GO:0097190 | Apoptotic signaling pathway | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
p-value up | p-value down | FDR up | FDR down |
---|---|---|---|
0.6782370009 | 0.7675422400 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
Data source | Up or down | Log fold change |
---|---|---|
GSE11954 | Up | 0.1255890043 |
GSE13712_SHEAR | Down | -0.0691921650 |
GSE13712_STATIC | Down | -0.0444386291 |
GSE19018 | Up | 0.2333695923 |
GSE19899_A1 | Up | 0.0221991840 |
GSE19899_A2 | Up | 0.0626040055 |
PubMed_21979375_A1 | Up | 0.4350974074 |
PubMed_21979375_A2 | Up | 0.0859598073 |
GSE35957 | Down | -0.2785807296 |
GSE36640 | Up | 0.0596816925 |
GSE54402 | Up | 0.3686325041 |
GSE9593 | Up | 0.1149510870 |
GSE43922 | Up | 0.0224496039 |
GSE24585 | Down | -0.1467510102 |
GSE37065 | Down | -0.0822312948 |
GSE28863_A1 | Down | -0.0761504900 |
GSE28863_A2 | Down | -0.2332339883 |
GSE28863_A3 | Up | 0.0759217132 |
GSE28863_A4 | Up | 0.0444652855 |
GSE48662 | Down | -0.1339681715 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
---|---|---|---|---|---|
hsa-miR-320b | MIMAT0005792 | MIRT036240 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-615-3p | MIMAT0003283 | MIRT039613 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-484 | MIMAT0002174 | MIRT041941 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-378a-3p | MIMAT0000732 | MIRT043902 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-320a | MIMAT0000510 | MIRT044819 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-185-5p | MIMAT0000455 | MIRT045345 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-let-7c-5p | MIMAT0000064 | MIRT051853 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord