HCSGD entry for UBA52


1. General information

Official gene symbolUBA52
Entrez ID7311
Gene full nameubiquitin A-52 residue ribosomal protein fusion product 1
Other gene symbolsCEP52 HUBCEP52 L40 RPL40
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000082G1/S transition of mitotic cell cycleTASbiological_process
GO:0000122Negative regulation of transcription from RNA polymerase II promoterTASbiological_process
GO:0000184Nuclear-transcribed mRNA catabolic process, nonsense-mediated decayTASbiological_process
GO:0000187Activation of MAPK activityTASbiological_process
GO:0000209Protein polyubiquitinationTASbiological_process
GO:0000278Mitotic cell cycleTASbiological_process
GO:0002224Toll-like receptor signaling pathwayTASbiological_process
GO:0002474Antigen processing and presentation of peptide antigen via MHC class ITASbiological_process
GO:0002479Antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependentTASbiological_process
GO:0002755MyD88-dependent toll-like receptor signaling pathwayTASbiological_process
GO:0002756MyD88-independent toll-like receptor signaling pathwayTASbiological_process
GO:0003735Structural constituent of ribosomeIEA NASmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005654NucleoplasmTAScellular_component
GO:0005765Lysosomal membraneIDAcellular_component
GO:0005829CytosolTAScellular_component
GO:0005840RibosomeIEAcellular_component
GO:0005886Plasma membraneTAScellular_component
GO:0006281DNA repairTASbiological_process
GO:0006351Transcription, DNA-templatedTASbiological_process
GO:0006367Transcription initiation from RNA polymerase II promoterTASbiological_process
GO:0006412TranslationIEA NAS TASbiological_process
GO:0006413Translational initiationTASbiological_process
GO:0006414Translational elongationTASbiological_process
GO:0006415Translational terminationTASbiological_process
GO:0006464Cellular protein modification processTASbiological_process
GO:0006614SRP-dependent cotranslational protein targeting to membraneTASbiological_process
GO:0006915Apoptotic processTASbiological_process
GO:0006977DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrestTASbiological_process
GO:0007141Male meiosis IIEAbiological_process
GO:0007144Female meiosis IIEAbiological_process
GO:0007173Epidermal growth factor receptor signaling pathwayTASbiological_process
GO:0007179Transforming growth factor beta receptor signaling pathwayTASbiological_process
GO:0007219Notch signaling pathwayTASbiological_process
GO:0007220Notch receptor processingTASbiological_process
GO:0007249I-kappaB kinase/NF-kappaB signalingTASbiological_process
GO:0007254JNK cascadeTASbiological_process
GO:0008543Fibroblast growth factor receptor signaling pathwayTASbiological_process
GO:0008585Female gonad developmentIEAbiological_process
GO:0010008Endosome membraneTAScellular_component
GO:0010467Gene expressionTASbiological_process
GO:0010992Ubiquitin homeostasisIEAbiological_process
GO:0016032Viral processTASbiological_process
GO:0016070RNA metabolic processTASbiological_process
GO:0016071MRNA metabolic processTASbiological_process
GO:0016197Endosomal transportTASbiological_process
GO:0019058Viral life cycleTASbiological_process
GO:0019068Virion assemblyTASbiological_process
GO:0019082Viral protein processingTASbiological_process
GO:0019083Viral transcriptionTASbiological_process
GO:0019221Cytokine-mediated signaling pathwayTASbiological_process
GO:0021888Hypothalamus gonadotrophin-releasing hormone neuron developmentIEAbiological_process
GO:0022625Cytosolic large ribosomal subunitIDAcellular_component
GO:0030512Negative regulation of transforming growth factor beta receptor signaling pathwayTASbiological_process
GO:0030666Endocytic vesicle membraneTAScellular_component
GO:0031145Anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic processTASbiological_process
GO:0032479Regulation of type I interferon productionTASbiological_process
GO:0032480Negative regulation of type I interferon productionTASbiological_process
GO:0032481Positive regulation of type I interferon productionTASbiological_process
GO:0034134Toll-like receptor 2 signaling pathwayTASbiological_process
GO:0034138Toll-like receptor 3 signaling pathwayTASbiological_process
GO:0034142Toll-like receptor 4 signaling pathwayTASbiological_process
GO:0034146Toll-like receptor 5 signaling pathwayTASbiological_process
GO:0034162Toll-like receptor 9 signaling pathwayTASbiological_process
GO:0034166Toll-like receptor 10 signaling pathwayTASbiological_process
GO:0034220Ion transmembrane transportTASbiological_process
GO:0035666TRIF-dependent toll-like receptor signaling pathwayTASbiological_process
GO:0035872Nucleotide-binding domain, leucine rich repeat containing receptor signaling pathwayTASbiological_process
GO:0038095Fc-epsilon receptor signaling pathwayTASbiological_process
GO:0038123Toll-like receptor TLR1:TLR2 signaling pathwayTASbiological_process
GO:0038124Toll-like receptor TLR6:TLR2 signaling pathwayTASbiological_process
GO:0042059Negative regulation of epidermal growth factor receptor signaling pathwayTASbiological_process
GO:0042590Antigen processing and presentation of exogenous peptide antigen via MHC class ITASbiological_process
GO:0042981Regulation of apoptotic processTASbiological_process
GO:0043065Positive regulation of apoptotic processTASbiological_process
GO:0043066Negative regulation of apoptotic processTASbiological_process
GO:0043123Positive regulation of I-kappaB kinase/NF-kappaB signalingTASbiological_process
GO:0044267Cellular protein metabolic processTASbiological_process
GO:0045087Innate immune responseTASbiological_process
GO:0045944Positive regulation of transcription from RNA polymerase II promoterTASbiological_process
GO:0048011Neurotrophin TRK receptor signaling pathwayTASbiological_process
GO:0050852T cell receptor signaling pathwayTASbiological_process
GO:0051092Positive regulation of NF-kappaB transcription factor activityTASbiological_process
GO:0051403Stress-activated MAPK cascadeTASbiological_process
GO:0051436Negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycleTASbiological_process
GO:0051437Positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycleTASbiological_process
GO:0051439Regulation of ubiquitin-protein ligase activity involved in mitotic cell cycleTASbiological_process
GO:0055085Transmembrane transportTASbiological_process
GO:0060613Fat pad developmentIEAbiological_process
GO:0061418Regulation of transcription from RNA polymerase II promoter in response to hypoxiaTASbiological_process
GO:0070423Nucleotide-binding oligomerization domain containing signaling pathwayTASbiological_process
GO:0071456Cellular response to hypoxiaTASbiological_process
GO:0072520Seminiferous tubule developmentIEAbiological_process
GO:0097009Energy homeostasisIEAbiological_process
GO:0097190Apoptotic signaling pathwayTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.67823700090.76754224000.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1255890043
GSE13712_SHEARDown-0.0691921650
GSE13712_STATICDown-0.0444386291
GSE19018Up0.2333695923
GSE19899_A1Up0.0221991840
GSE19899_A2Up0.0626040055
PubMed_21979375_A1Up0.4350974074
PubMed_21979375_A2Up0.0859598073
GSE35957Down-0.2785807296
GSE36640Up0.0596816925
GSE54402Up0.3686325041
GSE9593Up0.1149510870
GSE43922Up0.0224496039
GSE24585Down-0.1467510102
GSE37065Down-0.0822312948
GSE28863_A1Down-0.0761504900
GSE28863_A2Down-0.2332339883
GSE28863_A3Up0.0759217132
GSE28863_A4Up0.0444652855
GSE48662Down-0.1339681715

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-320bMIMAT0005792MIRT036240CLASHFunctional MTI (Weak)23622248
hsa-miR-615-3pMIMAT0003283MIRT039613CLASHFunctional MTI (Weak)23622248
hsa-miR-484MIMAT0002174MIRT041941CLASHFunctional MTI (Weak)23622248
hsa-miR-378a-3pMIMAT0000732MIRT043902CLASHFunctional MTI (Weak)23622248
hsa-miR-320aMIMAT0000510MIRT044819CLASHFunctional MTI (Weak)23622248
hsa-miR-185-5pMIMAT0000455MIRT045345CLASHFunctional MTI (Weak)23622248
hsa-let-7c-5pMIMAT0000064MIRT051853CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.