HCSGD entry for VPS51
1. General information
| Official gene symbol | VPS51 |
|---|---|
| Entrez ID | 738 |
| Gene full name | vacuolar protein sorting 51 homolog (S. cerevisiae) |
| Other gene symbols | ANG2 ANG3 C11orf2 C11orf3 FFR |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000938 | GARP complex | IDA | cellular_component |
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0006869 | Lipid transport | IEA | biological_process |
| GO:0006914 | Autophagy | IMP | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016021 | Integral component of membrane | TAS | cellular_component |
| GO:0017119 | Golgi transport complex | IEA | cellular_component |
| GO:0042147 | Retrograde transport, endosome to Golgi | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8441028874 | 0.0251967061 | 0.9999902473 | 0.3051366605 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2126873545 |
| GSE13712_SHEAR | Down | -0.6516273430 |
| GSE13712_STATIC | Down | -0.7452558630 |
| GSE19018 | Up | 0.1655097194 |
| GSE19899_A1 | Down | -0.5415135931 |
| GSE19899_A2 | Down | -0.3621652407 |
| PubMed_21979375_A1 | Up | 1.1024034005 |
| PubMed_21979375_A2 | Up | 1.2308204274 |
| GSE35957 | Down | -0.1305525960 |
| GSE36640 | Down | -0.4916169643 |
| GSE54402 | Up | 0.1575365915 |
| GSE9593 | Down | -0.4925884929 |
| GSE43922 | Down | -0.1068310684 |
| GSE24585 | Down | -0.1200198428 |
| GSE37065 | Down | -0.4140741732 |
| GSE28863_A1 | Up | 0.0867220901 |
| GSE28863_A2 | Down | -0.5292979085 |
| GSE28863_A3 | Down | -0.4115812970 |
| GSE28863_A4 | Down | -0.0884501103 |
| GSE48662 | Up | 0.3334096677 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT032314 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-324-5p | MIMAT0000761 | MIRT043055 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-182-5p | MIMAT0000259 | MIRT047211 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
