HCSGD entry for CCDC86
1. General information
| Official gene symbol | CCDC86 |
|---|---|
| Entrez ID | 79080 |
| Gene full name | coiled-coil domain containing 86 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0016032 | Viral process | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0036863379 | 0.2377434178 | 0.1631743289 | 0.9386378297 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4115863123 |
| GSE13712_SHEAR | Up | 0.2101688025 |
| GSE13712_STATIC | Up | 0.1967648488 |
| GSE19018 | Down | -0.9253133032 |
| GSE19899_A1 | Up | 0.8524854007 |
| GSE19899_A2 | Up | 1.5173746816 |
| PubMed_21979375_A1 | Up | 2.9692210014 |
| PubMed_21979375_A2 | Up | 2.3779536617 |
| GSE35957 | Down | -0.7578265872 |
| GSE36640 | Down | -0.4616471301 |
| GSE54402 | Up | 1.1905732422 |
| GSE9593 | Up | 0.2953467785 |
| GSE43922 | Up | 0.5648167317 |
| GSE24585 | Down | -1.2452459667 |
| GSE37065 | Down | -0.0571113502 |
| GSE28863_A1 | Down | -0.1484363954 |
| GSE28863_A2 | Up | 0.0300940636 |
| GSE28863_A3 | Up | 0.1101843765 |
| GSE28863_A4 | Up | 0.0459958571 |
| GSE48662 | Up | 0.4394919221 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022797 | Proteomics;Microarray | Non-Functional MTI (Weak) | 18668037 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049209 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
