HCSGD entry for TNIP3
1. General information
| Official gene symbol | TNIP3 |
|---|---|
| Entrez ID | 79931 |
| Gene full name | TNFAIP3 interacting protein 3 |
| Other gene symbols | ABIN-3 LIND |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0002756 | MyD88-independent toll-like receptor signaling pathway | IDA | biological_process |
| GO:0006954 | Inflammatory response | IEA | biological_process |
| GO:0031593 | Polyubiquitin binding | IDA | molecular_function |
| GO:0034142 | Toll-like receptor 4 signaling pathway | IDA | biological_process |
| GO:0043124 | Negative regulation of I-kappaB kinase/NF-kappaB signaling | IDA | biological_process |
| GO:0071222 | Cellular response to lipopolysaccharide | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0019075643 | 0.9540315338 | 0.1164941995 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2283271944 |
| GSE13712_SHEAR | Up | 0.3734442260 |
| GSE13712_STATIC | Up | 0.4283109001 |
| GSE19018 | Down | -0.0252687274 |
| GSE19899_A1 | Up | 0.1229641065 |
| GSE19899_A2 | Up | 2.2613647730 |
| PubMed_21979375_A1 | Up | 4.1742989758 |
| PubMed_21979375_A2 | Up | 1.9659677016 |
| GSE35957 | Up | 0.8342368321 |
| GSE36640 | Down | -0.0713135310 |
| GSE54402 | Up | 5.1084654980 |
| GSE9593 | Up | 0.0427823249 |
| GSE43922 | Up | 0.1085030948 |
| GSE24585 | Up | 0.0645711364 |
| GSE37065 | Up | 0.7985112422 |
| GSE28863_A1 | Down | -0.1676143747 |
| GSE28863_A2 | Down | -0.0771325926 |
| GSE28863_A3 | Down | -0.1374493890 |
| GSE28863_A4 | Down | -0.0644937985 |
| GSE48662 | Down | -0.1298917158 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-142-3p | MIMAT0000434 | MIRT021541 | Microarray | Functional MTI (Weak) | 17612493 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
