HCSGD entry for CXXC4
1. General information
| Official gene symbol | CXXC4 |
|---|---|
| Entrez ID | 80319 |
| Gene full name | CXXC finger protein 4 |
| Other gene symbols | IDAX |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0007352 | Zygotic specification of dorsal/ventral axis | ISS | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0016023 | Cytoplasmic membrane-bounded vesicle | IEA | cellular_component |
| GO:0016055 | Wnt signaling pathway | IEA | biological_process |
| GO:0030165 | PDZ domain binding | IEA IPI | molecular_function |
| GO:0030178 | Negative regulation of Wnt signaling pathway | IDA | biological_process |
| GO:0031410 | Cytoplasmic vesicle | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7186120284 | 0.8430207553 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1073007940 |
| GSE13712_SHEAR | Down | -0.0369898317 |
| GSE13712_STATIC | Down | -0.0774623850 |
| GSE19018 | Up | 0.0032313065 |
| GSE19899_A1 | Down | -0.0165670895 |
| GSE19899_A2 | Up | 0.1992706890 |
| PubMed_21979375_A1 | Down | -0.0668123959 |
| PubMed_21979375_A2 | Up | 0.0009247288 |
| GSE35957 | Up | 0.0051598950 |
| GSE36640 | Down | -0.1840138697 |
| GSE54402 | Up | 0.0568972633 |
| GSE9593 | Down | -0.0218782639 |
| GSE43922 | Up | 0.2614911080 |
| GSE24585 | Down | -0.0044021326 |
| GSE37065 | Down | -0.1178811492 |
| GSE28863_A1 | Down | -0.0599285558 |
| GSE28863_A2 | Up | 0.0377788661 |
| GSE28863_A3 | Up | 0.1278008915 |
| GSE28863_A4 | Up | 0.1002170142 |
| GSE48662 | Up | 0.0206137535 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30b-3p | MIMAT0004589 | MIRT038653 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
