HCSGD entry for WDR82
1. General information
| Official gene symbol | WDR82 |
|---|---|
| Entrez ID | 80335 |
| Gene full name | WD repeat domain 82 |
| Other gene symbols | MST107 MSTP107 PRO2730 PRO34047 SWD2 TMEM113 WDR82A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000785 | Chromatin | IDA | cellular_component |
| GO:0003682 | Chromatin binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0018022 | Peptidyl-lysine methylation | IDA | biological_process |
| GO:0035097 | Histone methyltransferase complex | IDA | cellular_component |
| GO:0042800 | Histone methyltransferase activity (H3-K4 specific) | IDA | molecular_function |
| GO:0048188 | Set1C/COMPASS complex | IDA | cellular_component |
| GO:0051568 | Histone H3-K4 methylation | IDA IEA | biological_process |
| GO:0072357 | PTW/PP1 phosphatase complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4940720679 | 0.2140008396 | 0.9999902473 | 0.8932312242 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0242529261 |
| GSE13712_SHEAR | Down | -0.0642448572 |
| GSE13712_STATIC | Down | -0.1869884778 |
| GSE19018 | Down | -0.7829862461 |
| GSE19899_A1 | Up | 0.0418799676 |
| GSE19899_A2 | Up | 0.2486860293 |
| PubMed_21979375_A1 | Down | -0.3437627763 |
| PubMed_21979375_A2 | Up | 0.0914298326 |
| GSE35957 | Up | 0.0308380513 |
| GSE36640 | Down | -0.4357951098 |
| GSE54402 | Down | -0.0259325079 |
| GSE9593 | Down | -0.2101967974 |
| GSE43922 | Up | 0.0421660292 |
| GSE24585 | Down | -0.1630673508 |
| GSE37065 | Down | -0.1818221337 |
| GSE28863_A1 | Up | 1.0452920071 |
| GSE28863_A2 | Up | 0.3961985704 |
| GSE28863_A3 | Up | 0.3874477537 |
| GSE28863_A4 | Down | -0.3100941372 |
| GSE48662 | Up | 0.0877104881 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30a-5p | MIMAT0000087 | MIRT005216 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-30a-3p | MIMAT0000088 | MIRT028388 | qRT-PCR | Functional MTI (Weak) | 16239240 |
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040688 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050892 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
