HCSGD entry for NDEL1
1. General information
| Official gene symbol | NDEL1 |
|---|---|
| Entrez ID | 81565 |
| Gene full name | nudE nuclear distribution E homolog (A. nidulans)-like 1 |
| Other gene symbols | EOPA MITAP1 NUDEL |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000226 | Microtubule cytoskeleton organization | IEA | biological_process |
| GO:0000278 | Mitotic cell cycle | TAS | biological_process |
| GO:0000776 | Kinetochore | IDA | cellular_component |
| GO:0000777 | Condensed chromosome kinetochore | IEA | cellular_component |
| GO:0001764 | Neuron migration | IEA | biological_process |
| GO:0001833 | Inner cell mass cell proliferation | IEA | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005635 | Nuclear envelope | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005813 | Centrosome | IEA | cellular_component |
| GO:0005819 | Spindle | IEA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0005871 | Kinesin complex | IEA | cellular_component |
| GO:0005874 | Microtubule | IEA | cellular_component |
| GO:0007059 | Chromosome segregation | IMP | biological_process |
| GO:0008017 | Microtubule binding | IEA | molecular_function |
| GO:0008090 | Retrograde axon cargo transport | IEA | biological_process |
| GO:0021799 | Cerebral cortex radially oriented cell migration | IEA | biological_process |
| GO:0021955 | Central nervous system neuron axonogenesis | IEA | biological_process |
| GO:0030424 | Axon | IEA | cellular_component |
| GO:0031252 | Cell leading edge | IEA | cellular_component |
| GO:0032864 | Activation of Cdc42 GTPase activity | IEA | biological_process |
| GO:0043014 | Alpha-tubulin binding | IEA | molecular_function |
| GO:0044297 | Cell body | IEA | cellular_component |
| GO:0045773 | Positive regulation of axon extension | IEA | biological_process |
| GO:0047496 | Vesicle transport along microtubule | IEA | biological_process |
| GO:0048487 | Beta-tubulin binding | IEA | molecular_function |
| GO:0048680 | Positive regulation of axon regeneration | IEA | biological_process |
| GO:0051081 | Nuclear envelope disassembly | IEA | biological_process |
| GO:0051642 | Centrosome localization | IEA | biological_process |
| GO:0060052 | Neurofilament cytoskeleton organization | IEA | biological_process |
| GO:0060053 | Neurofilament cytoskeleton | IEA | cellular_component |
| GO:0070012 | Oligopeptidase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3069494168 | 0.8695305118 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1397732650 |
| GSE13712_SHEAR | Up | 0.0565429564 |
| GSE13712_STATIC | Up | 0.1100510999 |
| GSE19018 | Down | -0.0159128376 |
| GSE19899_A1 | Up | 0.0819933777 |
| GSE19899_A2 | Up | 0.1264959699 |
| PubMed_21979375_A1 | Up | 0.4932042421 |
| PubMed_21979375_A2 | Up | 0.0307483378 |
| GSE35957 | Down | -0.0053290641 |
| GSE36640 | Up | 0.4851507577 |
| GSE54402 | Up | 0.2101122835 |
| GSE9593 | Up | 0.1093751364 |
| GSE43922 | Up | 0.1880509210 |
| GSE24585 | Up | 0.0451250628 |
| GSE37065 | Down | -0.0195829429 |
| GSE28863_A1 | Up | 0.0014222059 |
| GSE28863_A2 | Down | -0.1533170007 |
| GSE28863_A3 | Down | -0.4922907538 |
| GSE28863_A4 | Up | 0.2637970665 |
| GSE48662 | Down | -0.0965725361 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020142 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027032 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT027990 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028403 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031092 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-125a-5p | MIMAT0000443 | MIRT045706 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
