HCSGD entry for ZNF239
1. General information
| Official gene symbol | ZNF239 |
|---|---|
| Entrez ID | 8187 |
| Gene full name | zinc finger protein 239 |
| Other gene symbols | HOK-2 MOK2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003723 | RNA binding | TAS | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8209131834 | 0.0299648228 | 0.9999902473 | 0.3269917496 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0395341688 |
| GSE13712_SHEAR | Up | 0.0164410019 |
| GSE13712_STATIC | Up | 0.1819252258 |
| GSE19018 | Down | -0.9321416783 |
| GSE19899_A1 | Down | -0.2597501632 |
| GSE19899_A2 | Up | 0.1550355837 |
| PubMed_21979375_A1 | Up | 0.9832932829 |
| PubMed_21979375_A2 | Up | 0.3599486021 |
| GSE35957 | Down | -0.4972585612 |
| GSE36640 | Down | -0.8234617344 |
| GSE54402 | Down | -0.0100489528 |
| GSE9593 | Down | -0.0446381742 |
| GSE43922 | Up | 0.1672053410 |
| GSE24585 | Down | -1.3244642326 |
| GSE37065 | Down | -0.1357776788 |
| GSE28863_A1 | Down | -0.2492910347 |
| GSE28863_A2 | Up | 0.0281415934 |
| GSE28863_A3 | Down | -0.2180447000 |
| GSE28863_A4 | Up | 0.0262702078 |
| GSE48662 | Down | -0.3898039365 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-378a-3p | MIMAT0000732 | MIRT043876 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
