HCSGD entry for C19orf12
1. General information
| Official gene symbol | C19orf12 |
|---|---|
| Entrez ID | 83636 |
| Gene full name | chromosome 19 open reading frame 12 |
| Other gene symbols | NBIA3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008219 | Cell death | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0031966 | Mitochondrial membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2699622013 | 0.8802375936 | 0.9670577844 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1820880456 |
| GSE13712_SHEAR | Down | -0.0899215510 |
| GSE13712_STATIC | Up | 0.1051912156 |
| GSE19018 | Down | -0.1857919813 |
| GSE19899_A1 | Up | 0.0602395784 |
| GSE19899_A2 | Up | 0.5384065586 |
| PubMed_21979375_A1 | Up | 0.2604981598 |
| PubMed_21979375_A2 | Up | 0.2209404954 |
| GSE35957 | Down | -0.0777870355 |
| GSE36640 | Up | 0.6573516280 |
| GSE54402 | Up | 0.0752115410 |
| GSE9593 | Up | 0.3728090188 |
| GSE43922 | Up | 0.0483849337 |
| GSE24585 | Down | -0.0525278912 |
| GSE37065 | Down | -0.1325032260 |
| GSE28863_A1 | Down | -0.1121020459 |
| GSE28863_A2 | Down | -0.1309896624 |
| GSE28863_A3 | Down | -0.1368625196 |
| GSE28863_A4 | Down | -0.0255480054 |
| GSE48662 | Up | 0.3702144589 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-7-5p | MIMAT0000252 | MIRT025866 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-484 | MIMAT0002174 | MIRT042283 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
