HCSGD entry for CALN1
1. General information
| Official gene symbol | CALN1 |
|---|---|
| Entrez ID | 83698 |
| Gene full name | calneuron 1 |
| Other gene symbols | CABP8 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0032588 | Trans-Golgi network membrane | IDA IEA | cellular_component |
| GO:0048471 | Perinuclear region of cytoplasm | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7013939288 | 0.8173685764 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0171108164 |
| GSE13712_SHEAR | Down | -0.0517277235 |
| GSE13712_STATIC | Down | -0.0891726265 |
| GSE19018 | Up | 0.0824351849 |
| GSE19899_A1 | Up | 0.0017623044 |
| GSE19899_A2 | Up | 0.0137143974 |
| PubMed_21979375_A1 | Up | 0.0985274906 |
| PubMed_21979375_A2 | Up | 0.0955282911 |
| GSE35957 | Up | 0.0956337917 |
| GSE36640 | Up | 0.1500212540 |
| GSE54402 | Down | -0.0268351599 |
| GSE9593 | Down | -0.0095818137 |
| GSE43922 | Up | 0.0245483157 |
| GSE24585 | Down | -0.0290854138 |
| GSE37065 | Up | 0.0072480530 |
| GSE28863_A1 | Down | -0.0950748171 |
| GSE28863_A2 | Up | 0.2954270554 |
| GSE28863_A3 | Up | 0.1182713913 |
| GSE28863_A4 | Up | 0.0172905951 |
| GSE48662 | Down | -0.0188683445 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-148b-3p | MIMAT0000759 | MIRT019343 | Microarray | Functional MTI (Weak) | 17612493 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
