HCSGD entry for VPS25

1. General information

Official gene symbolVPS25
Entrez ID84313
Gene full namevacuolar protein sorting 25 homolog (S. cerevisiae)
Other gene symbolsDERP9 EAP20 FAP20
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005654NucleoplasmIEAcellular_component
GO:0005739MitochondrionIEAcellular_component
GO:0005829CytosolTAScellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0006355Regulation of transcription, DNA-templatedIEAbiological_process
GO:0010008Endosome membraneIEAcellular_component
GO:0015031Protein transportIEAbiological_process
GO:0016197Endosomal transportTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.98437479960.03609458610.99999024730.3581466717

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0804639767
GSE13712_SHEARDown-0.4777461188
GSE13712_STATICDown-0.0180335212
GSE19018Up0.0639986661
GSE19899_A1Down-0.5869947634
GSE19899_A2Down-0.3834391760
PubMed_21979375_A1Down-0.0503248303
PubMed_21979375_A2Down-0.3093882243
GSE35957Down-0.0803452913
GSE36640Down-0.3651780251
GSE54402Down-0.2151409265
GSE9593Down-0.2342055763
GSE43922Down-0.3122331461
GSE24585Down-0.0825700047
GSE37065Down-0.3893126812
GSE28863_A1Up0.0153154531
GSE28863_A2Down-0.0778273439
GSE28863_A3Down-0.3548557301
GSE28863_A4Up0.0407976049
GSE48662Down-0.2804735902

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-24-3pMIMAT0000080MIRT030413MicroarrayFunctional MTI (Weak)19748357
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.