HCSGD entry for AGBL4
1. General information
| Official gene symbol | AGBL4 |
|---|---|
| Entrez ID | 84871 |
| Gene full name | ATP/GTP binding protein-like 4 |
| Other gene symbols | CCP6 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004181 | Metallocarboxypeptidase activity | IEA ISS | molecular_function |
| GO:0005829 | Cytosol | ISS | cellular_component |
| GO:0006508 | Proteolysis | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0015631 | Tubulin binding | ISS | molecular_function |
| GO:0035609 | C-terminal protein deglutamylation | ISS | biological_process |
| GO:0035610 | Protein side chain deglutamylation | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7531784241 | 0.8705833859 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0089778997 |
| GSE13712_SHEAR | Down | -0.0637667109 |
| GSE13712_STATIC | Down | -0.1391918868 |
| GSE19018 | Down | -0.0394475066 |
| GSE19899_A1 | Up | 0.1141931563 |
| GSE19899_A2 | Down | -0.0120004485 |
| PubMed_21979375_A1 | Up | 0.2132091325 |
| PubMed_21979375_A2 | Down | -0.1849984495 |
| GSE35957 | Up | 0.1611924070 |
| GSE36640 | Up | 0.0528706884 |
| GSE54402 | Up | 0.0115765963 |
| GSE9593 | Up | 0.1294883960 |
| GSE43922 | Up | 0.0921642241 |
| GSE24585 | Up | 0.1005393113 |
| GSE37065 | Down | -0.0343065456 |
| GSE28863_A1 | Down | -0.0782654593 |
| GSE28863_A2 | Up | 0.0653613135 |
| GSE28863_A3 | Up | 0.1133654630 |
| GSE28863_A4 | Up | 0.0626227829 |
| GSE48662 | Down | -0.0237509166 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
