HCSGD entry for GTDC2
1. General information
| Official gene symbol | GTDC2 |
|---|---|
| Entrez ID | 84892 |
| Gene full name | glycosyltransferase-like domain containing 2 |
| Other gene symbols | AGO61 C3orf39 MDDGA8 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005783 | Endoplasmic reticulum | IDA | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0006493 | Protein O-linked glycosylation | IDA | biological_process |
| GO:0008375 | Acetylglucosaminyltransferase activity | IDA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4117719312 | 0.2797068576 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0796611571 |
| GSE13712_SHEAR | Down | -0.9321405787 |
| GSE13712_STATIC | Down | -0.0846212685 |
| GSE19018 | Up | 0.1818199380 |
| GSE19899_A1 | Down | -0.1364152006 |
| GSE19899_A2 | Up | 0.1405467823 |
| PubMed_21979375_A1 | Down | -0.4835286711 |
| PubMed_21979375_A2 | Up | 0.9817126140 |
| GSE35957 | Down | -0.2156782243 |
| GSE36640 | Up | 0.2257449487 |
| GSE54402 | Down | -0.7260131898 |
| GSE9593 | Up | 0.1728460157 |
| GSE43922 | Up | 0.2123298396 |
| GSE24585 | Down | -0.0920916973 |
| GSE37065 | Down | -0.0942880512 |
| GSE28863_A1 | Up | 0.0600267460 |
| GSE28863_A2 | Down | -0.0619430634 |
| GSE28863_A3 | Up | 0.1870708908 |
| GSE28863_A4 | Down | -0.0657335872 |
| GSE48662 | Up | 0.5123511939 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-122-5p | MIMAT0000421 | MIRT023252 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-361-5p | MIMAT0000703 | MIRT044111 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-4326 | MIMAT0016888 | MIRT052836 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
