HCSGD entry for RNFT2
1. General information
| Official gene symbol | RNFT2 |
|---|---|
| Entrez ID | 84900 |
| Gene full name | ring finger protein, transmembrane 2 |
| Other gene symbols | TMEM118 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9920090270 | 0.0193041564 | 0.9999902473 | 0.2708458955 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0522460120 |
| GSE13712_SHEAR | Down | -0.3975048744 |
| GSE13712_STATIC | Down | -0.4429621195 |
| GSE19018 | Down | -0.0591492637 |
| GSE19899_A1 | Down | -0.1810284349 |
| GSE19899_A2 | Down | -0.8919479925 |
| PubMed_21979375_A1 | Down | -0.7053082922 |
| PubMed_21979375_A2 | Down | -0.5697027583 |
| GSE35957 | Down | -0.3399761060 |
| GSE36640 | Down | -1.0988807232 |
| GSE54402 | Down | -0.2921088895 |
| GSE9593 | Down | -0.0489022693 |
| GSE43922 | Down | -0.0860874823 |
| GSE24585 | Down | -0.5369134194 |
| GSE37065 | Up | 0.0445252254 |
| GSE28863_A1 | Down | -0.1237012453 |
| GSE28863_A2 | Up | 0.1029937598 |
| GSE28863_A3 | Up | 0.2059961031 |
| GSE28863_A4 | Up | 0.1215232399 |
| GSE48662 | Down | -0.1101217490 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-197-3p | MIMAT0000227 | MIRT048111 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
