HCSGD entry for CGNL1
1. General information
| Official gene symbol | CGNL1 |
|---|---|
| Entrez ID | 84952 |
| Gene full name | cingulin-like 1 |
| Other gene symbols | JACOP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003774 | Motor activity | IEA | molecular_function |
| GO:0005923 | Tight junction | IEA | cellular_component |
| GO:0016459 | Myosin complex | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8520207857 | 0.1385466130 | 0.9999902473 | 0.7167227594 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0141578517 |
| GSE13712_SHEAR | Down | -1.6135120667 |
| GSE13712_STATIC | Down | -1.2197582119 |
| GSE19018 | Down | -0.0030295300 |
| GSE19899_A1 | Up | 0.0233154941 |
| GSE19899_A2 | Down | -0.1054363020 |
| PubMed_21979375_A1 | Down | -0.0409587618 |
| PubMed_21979375_A2 | Up | 0.1579760590 |
| GSE35957 | Down | -0.0375996478 |
| GSE36640 | Down | -0.2130404921 |
| GSE54402 | Down | -0.1148791808 |
| GSE9593 | Up | 0.0767492092 |
| GSE43922 | Up | 0.0117821890 |
| GSE24585 | Up | 0.0877777953 |
| GSE37065 | Up | 0.3739896936 |
| GSE28863_A1 | Up | 0.0087608558 |
| GSE28863_A2 | Down | -0.0382882948 |
| GSE28863_A3 | Up | 0.2090756935 |
| GSE28863_A4 | Up | 0.0572967765 |
| GSE48662 | Down | -0.1214615570 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018735 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024620 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026805 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037512 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-130b-5p | MIMAT0004680 | MIRT038313 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-125a-5p | MIMAT0000443 | MIRT045751 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
