HCSGD entry for SYTL1
1. General information
| Official gene symbol | SYTL1 |
|---|---|
| Entrez ID | 84958 |
| Gene full name | synaptotagmin-like 1 |
| Other gene symbols | JFC1 SLP1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0006886 | Intracellular protein transport | IEA | biological_process |
| GO:0006887 | Exocytosis | IDA IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0017137 | Rab GTPase binding | IEA | molecular_function |
| GO:0019897 | Extrinsic component of plasma membrane | ISS | cellular_component |
| GO:0042043 | Neurexin family protein binding | ISS | molecular_function |
| GO:0042470 | Melanosome | ISS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3829580373 | 0.9259471487 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1049726855 |
| GSE13712_SHEAR | Down | -0.0965395188 |
| GSE13712_STATIC | Down | -0.2451929298 |
| GSE19018 | Up | 0.1353086303 |
| GSE19899_A1 | Down | -0.0238632216 |
| GSE19899_A2 | Up | 0.1479872955 |
| PubMed_21979375_A1 | Up | 0.2974719587 |
| PubMed_21979375_A2 | Up | 0.0588597032 |
| GSE35957 | Up | 0.1841381698 |
| GSE36640 | Down | -0.0084711467 |
| GSE54402 | Up | 0.0489594125 |
| GSE9593 | Up | 0.1045602227 |
| GSE43922 | Up | 0.1604572376 |
| GSE24585 | Up | 0.0856491563 |
| GSE37065 | Down | -0.1137881505 |
| GSE28863_A1 | Down | -0.0068558303 |
| GSE28863_A2 | Up | 0.1729147596 |
| GSE28863_A3 | Up | 0.2692202067 |
| GSE28863_A4 | Up | 0.0916716278 |
| GSE48662 | Up | 0.2462154578 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018489 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
