HCSGD entry for NIPSNAP1
1. General information
| Official gene symbol | NIPSNAP1 |
|---|---|
| Entrez ID | 8508 |
| Gene full name | nipsnap homolog 1 (C. elegans) |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005739 | Mitochondrion | ISS | cellular_component |
| GO:0005743 | Mitochondrial inner membrane | IEA | cellular_component |
| GO:0019233 | Sensory perception of pain | IEA | biological_process |
| GO:0042165 | Neurotransmitter binding | IEA | molecular_function |
| GO:0097060 | Synaptic membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9913435052 | 0.0023335967 | 0.9999902473 | 0.0936320122 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2892105595 |
| GSE13712_SHEAR | Down | -0.3694923698 |
| GSE13712_STATIC | Down | -0.2738913742 |
| GSE19018 | Up | 0.3664876630 |
| GSE19899_A1 | Down | -0.4723771695 |
| GSE19899_A2 | Down | -0.5719204986 |
| PubMed_21979375_A1 | Down | -2.3886207483 |
| PubMed_21979375_A2 | Down | -1.9491364859 |
| GSE35957 | Down | -0.5974745350 |
| GSE36640 | Down | -0.5491588515 |
| GSE54402 | Down | -1.1941171180 |
| GSE9593 | Up | 0.3304473033 |
| GSE43922 | Down | -0.7147190902 |
| GSE24585 | Down | -0.2879452324 |
| GSE37065 | Down | -0.2873487195 |
| GSE28863_A1 | Down | -0.0568482423 |
| GSE28863_A2 | Down | -0.1572208010 |
| GSE28863_A3 | Down | -0.5926519934 |
| GSE28863_A4 | Up | 0.0014893841 |
| GSE48662 | Down | -0.0926861879 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017041 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-145-5p | MIMAT0000437 | MIRT021531 | Reporter assay;Microarray | Functional MTI | 21351259 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027473 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
