HCSGD entry for C5orf30
1. General information
| Official gene symbol | C5orf30 |
|---|---|
| Entrez ID | 90355 |
| Gene full name | chromosome 5 open reading frame 30 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0035869 | Ciliary transition zone | IDA | cellular_component |
| GO:0060271 | Cilium morphogenesis | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1039490521 | 0.0130409521 | 0.6701482488 | 0.2252302493 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.9695336007 |
| GSE13712_SHEAR | Up | 0.1929251084 |
| GSE13712_STATIC | Up | 0.0657287590 |
| GSE19018 | Up | 0.3428378263 |
| GSE19899_A1 | Up | 0.0415990347 |
| GSE19899_A2 | Up | 0.2729689473 |
| PubMed_21979375_A1 | Up | 0.0894736516 |
| PubMed_21979375_A2 | Down | -1.0951952041 |
| GSE35957 | Down | -0.3743174413 |
| GSE36640 | Up | 0.2409604129 |
| GSE54402 | Up | 0.8671839691 |
| GSE9593 | Up | 0.5025391003 |
| GSE43922 | Down | -0.1883084101 |
| GSE24585 | Down | -0.1921840021 |
| GSE37065 | Down | -0.1077715915 |
| GSE28863_A1 | Down | -1.3381293939 |
| GSE28863_A2 | Up | 0.1256400771 |
| GSE28863_A3 | Down | -2.1516362271 |
| GSE28863_A4 | Down | -0.0652868742 |
| GSE48662 | Down | -0.4503244589 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024398 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026965 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027835 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
