HCSGD entry for SYNGR2
1. General information
| Official gene symbol | SYNGR2 |
|---|---|
| Entrez ID | 9144 |
| Gene full name | synaptogyrin 2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0006605 | Protein targeting | IEA | biological_process |
| GO:0008021 | Synaptic vesicle | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA NAS | cellular_component |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0561180654 | 0.5673399909 | 0.5150221757 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2176868855 |
| GSE13712_SHEAR | Down | -0.1587972315 |
| GSE13712_STATIC | Up | 0.3219331082 |
| GSE19018 | Up | 0.6632813621 |
| GSE19899_A1 | Down | -0.2308941780 |
| GSE19899_A2 | Up | 0.9743090030 |
| PubMed_21979375_A1 | Up | 0.8862769283 |
| PubMed_21979375_A2 | Up | 0.4348867871 |
| GSE35957 | Down | -0.6670468731 |
| GSE36640 | Up | 0.5722535786 |
| GSE54402 | Down | -0.1605682072 |
| GSE9593 | Up | 0.2691240384 |
| GSE43922 | Up | 0.3580900060 |
| GSE24585 | Down | -0.0356765181 |
| GSE37065 | Up | 0.0698029491 |
| GSE28863_A1 | Down | -0.7494805008 |
| GSE28863_A2 | Up | 0.0019087158 |
| GSE28863_A3 | Down | -0.0780029283 |
| GSE28863_A4 | Down | -0.0635645139 |
| GSE48662 | Up | 0.1466541383 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT002717 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT002717 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-9-5p | MIMAT0000441 | MIRT021478 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027625 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-96-5p | MIMAT0000095 | MIRT027906 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032328 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032328 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-455-3p | MIMAT0004784 | MIRT037835 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042262 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-5p | MIMAT0000761 | MIRT043163 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044770 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
