HCSGD entry for ISX
1. General information
| Official gene symbol | ISX |
|---|---|
| Entrez ID | 91464 |
| Gene full name | intestine-specific homeobox |
| Other gene symbols | Pix-1 RAXLX |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006357 | Regulation of transcription from RNA polymerase II promoter | IEA | biological_process |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
| GO:1901738 | Regulation of vitamin A metabolic process | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5566479807 | 0.9322789636 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0033386381 |
| GSE13712_SHEAR | Up | 0.0279730535 |
| GSE13712_STATIC | Up | 0.0727149255 |
| GSE19018 | Up | 0.0395857054 |
| GSE19899_A1 | Up | 0.1066017154 |
| GSE19899_A2 | Up | 0.0898463196 |
| PubMed_21979375_A1 | Down | -0.0389835795 |
| PubMed_21979375_A2 | Down | -0.0424085361 |
| GSE35957 | Up | 0.0968506641 |
| GSE36640 | Up | 0.2384095988 |
| GSE54402 | Down | -0.1172264444 |
| GSE9593 | Down | -0.0304967961 |
| GSE43922 | Up | 0.0797166882 |
| GSE24585 | Up | 0.0236930892 |
| GSE37065 | Up | 0.0089004851 |
| GSE28863_A1 | Up | 0.0009778099 |
| GSE28863_A2 | Up | 0.0225839582 |
| GSE28863_A3 | Up | 0.1943977406 |
| GSE28863_A4 | Up | 0.1732941465 |
| GSE48662 | Down | -0.0110123720 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-3928-3p | MIMAT0018205 | MIRT052890 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
