HCSGD entry for SLC28A1

1. General information

Official gene symbolSLC28A1
Entrez ID9154
Gene full namesolute carrier family 28 (sodium-coupled nucleoside transporter), member 1
Other gene symbolsCNT1 HCNT1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001882Nucleoside bindingIEAmolecular_function
GO:0005337Nucleoside transmembrane transporter activityTASmolecular_function
GO:0005415Nucleoside:sodium symporter activityIEAmolecular_function
GO:0005886Plasma membraneTAScellular_component
GO:0005887Integral component of plasma membraneTAScellular_component
GO:0006139Nucleobase-containing compound metabolic processTASbiological_process
GO:0015858Nucleoside transportTASbiological_process
GO:0016020MembraneIEA TAScellular_component
GO:0055085Transmembrane transportTASbiological_process
GO:1901642Nucleoside transmembrane transportTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.67426073100.86303303450.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0178145096
GSE13712_SHEARDown-0.0927208922
GSE13712_STATICDown-0.1263640489
GSE19018Up0.2821226398
GSE19899_A1Down-0.0059812607
GSE19899_A2Up0.1690414775
PubMed_21979375_A1Up0.0273274413
PubMed_21979375_A2Down-0.0779420493
GSE35957Up0.0896795210
GSE36640Up0.0982169223
GSE54402Up0.0452498842
GSE9593Down-0.0420677599
GSE43922Up0.0138780660
GSE24585Up0.0972846950
GSE37065Down-0.0434611766
GSE28863_A1Up0.0179195317
GSE28863_A2Down-0.0870044541
GSE28863_A3Up0.1851939554
GSE28863_A4Down-0.0152251873
GSE48662Up0.3016561225

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-26b-5pMIMAT0000083MIRT030057MicroarrayFunctional MTI (Weak)19088304
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.