HCSGD entry for TTC5
1. General information
| Official gene symbol | TTC5 |
|---|---|
| Entrez ID | 91875 |
| Gene full name | tetratricopeptide repeat domain 5 |
| Other gene symbols | Strap |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003682 | Chromatin binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006281 | DNA repair | IEA | biological_process |
| GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6595298089 | 0.4116633753 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0302888724 |
| GSE13712_SHEAR | Down | -0.0556896912 |
| GSE13712_STATIC | Up | 0.1179073239 |
| GSE19018 | Down | -0.1060344366 |
| GSE19899_A1 | Down | -0.0788977503 |
| GSE19899_A2 | Up | 0.1202630402 |
| PubMed_21979375_A1 | Down | -0.1925900927 |
| PubMed_21979375_A2 | Down | -0.0060911737 |
| GSE35957 | Down | -0.0048234467 |
| GSE36640 | Up | 0.0446406105 |
| GSE54402 | Down | -0.1609370492 |
| GSE9593 | Up | 0.2819922941 |
| GSE43922 | Down | -0.0507164831 |
| GSE24585 | Up | 0.0280627065 |
| GSE37065 | Down | -0.1461784133 |
| GSE28863_A1 | Up | 0.4867134279 |
| GSE28863_A2 | Up | 0.0180235799 |
| GSE28863_A3 | Down | -0.7637006070 |
| GSE28863_A4 | Down | -0.0584024322 |
| GSE48662 | Up | 0.4195921361 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049643 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
