HCSGD entry for COPB2

1. General information

Official gene symbolCOPB2
Entrez ID9276
Gene full namecoatomer protein complex, subunit beta 2 (beta prime)
Other gene symbolsbeta'-COP
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005198Structural molecule activityIEAmolecular_function
GO:0005737CytoplasmIDAcellular_component
GO:0005794Golgi apparatusIDAcellular_component
GO:0005829CytosolTAScellular_component
GO:0006886Intracellular protein transportIEAbiological_process
GO:0006890Retrograde vesicle-mediated transport, Golgi to ERTASbiological_process
GO:0006891Intra-Golgi vesicle-mediated transportIDAbiological_process
GO:0015629Actin cytoskeletonIDAcellular_component
GO:0016192Vesicle-mediated transportIEAbiological_process
GO:0030117Membrane coatIEAcellular_component
GO:0030126COPI vesicle coatIDAcellular_component
GO:0048205COPI coating of Golgi vesicleTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.78509700240.36471095320.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1261616254
GSE13712_SHEARDown-0.2384396098
GSE13712_STATICUp0.0238356381
GSE19018Up0.2265241109
GSE19899_A1Up0.0931440281
GSE19899_A2Down-0.1088802960
PubMed_21979375_A1Up0.1349379069
PubMed_21979375_A2Up0.0370398359
GSE35957Down-0.1740128793
GSE36640Up0.1364783233
GSE54402Up0.1920346060
GSE9593Down-0.0899407099
GSE43922Down-0.0860983736
GSE24585Up0.0631248386
GSE37065Down-0.1311535427
GSE28863_A1Up0.0000166008
GSE28863_A2Up0.2421955946
GSE28863_A3Down-0.8059285572
GSE28863_A4Down-0.2148977134
GSE48662Down-0.0922122563

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-877-3pMIMAT0004950MIRT036883CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.