HCSGD entry for FAM189A2
1. General information
| Official gene symbol | FAM189A2 |
|---|---|
| Entrez ID | 9413 |
| Gene full name | family with sequence similarity 189, member A2 |
| Other gene symbols | C9orf61 RP11-548B3.1 X123 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4656165001 | 0.7224523004 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0179719614 |
| GSE13712_SHEAR | Down | -0.5145830194 |
| GSE13712_STATIC | Down | -0.3022426802 |
| GSE19018 | Up | 0.0539057125 |
| GSE19899_A1 | Up | 0.0418085839 |
| GSE19899_A2 | Up | 0.3846979922 |
| PubMed_21979375_A1 | Up | 0.1447184920 |
| PubMed_21979375_A2 | Up | 0.0715224014 |
| GSE35957 | Down | -0.0158185870 |
| GSE36640 | Up | 0.2637429747 |
| GSE54402 | Up | 0.1817445313 |
| GSE9593 | Up | 0.1467702262 |
| GSE43922 | Up | 0.0142433645 |
| GSE24585 | Down | -0.2217629928 |
| GSE37065 | Down | -0.0741039932 |
| GSE28863_A1 | Down | -0.0461078024 |
| GSE28863_A2 | Down | -0.0119250111 |
| GSE28863_A3 | Up | 0.2782638021 |
| GSE28863_A4 | Up | 0.0708149580 |
| GSE48662 | Up | 0.3074221465 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024593 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026758 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
