HCSGD entry for VGLL4
1. General information
| Official gene symbol | VGLL4 |
|---|---|
| Entrez ID | 9686 |
| Gene full name | vestigial like 4 (Drosophila) |
| Other gene symbols | VGL-4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1872901106 | 0.2710758254 | 0.8439602430 | 0.9956721742 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0642723135 |
| GSE13712_SHEAR | Down | -0.9923529830 |
| GSE13712_STATIC | Down | -0.4384129463 |
| GSE19018 | Up | 0.0743059361 |
| GSE19899_A1 | Down | -0.7370383982 |
| GSE19899_A2 | Up | 0.5984334320 |
| PubMed_21979375_A1 | Up | 0.5356523935 |
| PubMed_21979375_A2 | Up | 0.7898389582 |
| GSE35957 | Up | 0.2107342129 |
| GSE36640 | Up | 0.0904894761 |
| GSE54402 | Up | 0.2242167651 |
| GSE9593 | Up | 0.0106616443 |
| GSE43922 | Up | 0.0496021722 |
| GSE24585 | Up | 0.3413376374 |
| GSE37065 | Up | 0.1675817796 |
| GSE28863_A1 | Up | 0.0128525893 |
| GSE28863_A2 | Down | -0.3157696363 |
| GSE28863_A3 | Down | -0.0592179126 |
| GSE28863_A4 | Down | -0.1785685944 |
| GSE48662 | Up | 0.4844596795 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT019746 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-let-7e-5p | MIMAT0000066 | MIRT051646 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052473 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
